Posters

List of posters in conferences, workshops, meetings, etc.


2020

SI2-SSI: Distributed Workflow Management Research and Software in Support of Science
Ewa Deelman, Karan Vahi, Mats Rynge, Rajiv Mayani, Ryan Tanaka, Rafael Ferreira da Silva, George Papadimitriou, Tu Mai Anh Do, Miron Livny, Mark Coatsworth, 2020 NSF CSSI PI Meeting, Seattle, Washington, February, 2020.
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2019

Automated processing of phenotypic data submissions
R. Mayani, K. Vahi, J.L. Ambite, S. Sharma, M. Azaro, S. Wilson, B. Ruocco, G. Davis, M. Romanella, L. Brzustowicz, E. Deelman, Y. Arens, ASHG, , 2019.
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Enhancing access to data at the NIMH Repository and Genomics Resource
B.G. Ruocco, R. Mayani, S. Sharma, S. Wilson, K. Vahi, S. Voinea, G. Davis, J. ValentineCooper, W. Valentine-Cooper, J. Mathew, M. Romanella, Y. Arens, E. Deelman, M.A. Azaro, V.J. Vieland, J.L. Ambite, L.M. Brzustowicz, ASHG, , 2019.
Gearing the DECam Analysis Pipeline for Multi-Messenger Astronomy using Pegasus Workflows
K. Vahi, D. Goldstein, G. Papadimitriou, P. Nugent, and E. Deelman, Astronomical Data Analysis Software and Systems (ADASS) XXIX, , 2019.
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PANORAMA 360: Performance Data Capture and Analysis for End-to-End Scientific Workflows
George Papadimitriou, Rafael Ferreira da Silva, Karan Vahi, Rajiv Mayani, Mats Rynge, Ewa Deelman, Anirban Mandal, Cong Wang, Mariam Kiran, Vickie Lynch, Jeffrey Vetter, ModSim 2019, August, 2019.
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Accessing OLCF Resources Using Pegasus WMS
George Papadimitriou, Pavlo Svirin, Karan Vahi, Mats Rynge, Rafael Ferreira da Silva, Jason Kincl, Vickie Lynch, Ewa Deelman, Anirban Mandal, Jeffrey Vetter, Valentine Anantharaj, Jack Wells, Alexei Klimentov, Kaushik De, OLCF User Meeting 2019, May, 2019.
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2018

PANORAMA 360: Performance Data Capture and Analysis for End-to-End Scientific Workflows
G. Papadimitriou, R. Ferreira da Silva, K. Vahi, R. Mayani, M. Rynge, E. Deelman, A. Mandal, C. Wang, M. Kiran, V. Lynch, J. Vetter, DOE NGNS PI Meeting, September, 2018.
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WRENCH: A Simulation Workbench for Scientific Workflow Users, Developers, and Researchers
H. Casanova, R. Ferreira da Silva, F. Suter, S. Pandey, J. Oeth, R. Tanaka, SI2 PI Meeting 2018, May, 2018.
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Pegasus WMS and Panorama 360
G. Papadimitriou, E. Deelman, R. Ferreira da Silva, R. Filgueira, V. Lynch, A. Mandal, C. Wang, J. Vetter, USC Viterbi Annual Research Review, March, 2018.
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Event-Based Triggering and Management of Scientific Workflow Ensembles
S. Pandey, K. Vahi, R. Ferreira da Silva, E. Deelman, M. Jiang, A. Chu, C. Harrison, H. Casanova, HPC Asia 2018, January, 2018.
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2017

Enabling End-to-end Experiment Sharing and Reuse with Workflows via Jupyter Notebooks
R. Ferreira da Silva, K. Vahi, M. Rynge, R. Mayani, E. Deelman, Gateways 2017, October, 2017.
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PANORAMA: Predictive Modeling and Diagnostic Monitoring of Extreme Science Workflows
E. Deelman, C. Carothers, A. Mandal, B. Tierney, J. Vetter, I. Baldin, M. Blanco, R. Ferreira da Silva, M. Kiran, V. Lynch, S. Moore, P. Ruth, DOE NGNS PI Meeting, September, 2017.
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Data Flow Prioritization for Scientific Workflows Using A Virtual SDX on ExoGENI
A. Mandal, P. Ruth, I. Baldin, R. Ferreira da Silva, E. Deelman, GENI Engineering Conference 25, March, 2017.
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CIF21 DIBBs: Domain-Aware Management of Heterogeneous Workflows Active Data Management for Gravitational-Wave Science
D. Brown, E. Deelman, J. Qin, DIBBs PI Meeting, January, 2017.
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2016

Asterism: An Integrated, Complete, and Open-Source Approach for Running Seismologist Continuous Data-Intensive Analysis on Heterogeneous Systems
R. Ferreira da Silva, R. Filgueira, E. Deelman, M. Atikinson, AGU 2016, San Francisco, California, December, 2016.
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Automated Genotypic Imputation of PAGE II Data using Scientific Workflows
K. Vahi, S. Buyske, L. Zhou, T. Matise, E. Deelman, ASHG 2016, Vancouver, Canada, November, 2016.
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Pegasus: Automating the Execution of Computational Workflows
E. Deelman, K. Vahi, G. Juve, M. Rynge, R. Mayani, R. Ferreira da Silva, M. Livny, K. Wenger, ICT Air Force Research Lab Opening, Marina Del Rey, California, March, 2016.
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SSI: Distributed Workflow Management Research and Software in Support of Science
E. Deelman, K. Vahi, G. Juve, M. Rynge, R. Mayani, R. Ferreira da Silva, M. Livny, K. Wenger, SI2 PI Workshop, Arlington, Virginia, February, 2016.
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PANORAMA: Tools for Modeling, Monitoring, and Anomaly Detection in Scientific Workflow Execution
E. Deelman, C. Carothers, A. Mandal, B. Tierney, J. Vetter, I. Baldin, C. Castillo, G. Juve, D. Król, V. Lynch, B. Mayer, J. Meredith, T. Proffen, P. Ruth, R. Ferreira da Silva, Workshop on Modeling and Simulation (Modsim), August, 2016.
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2015

Pegasus WMS: Enabling Large Scale Workflows on National Cyberinfrastructure
K. Vahi, E. Deelman, G. Juve, M. Rynge, R. Mayani, R. Ferreira da Silva, XSEDE 2015, St Louis, Missouri, July, 2015.
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Pegasus WMS: Features For Pipelines Across Diverse Resources
K. Vahi, E. Deelman, G. Mehta, M. Rynge, F. Silva, P. Thomas, J. Vockler, B. Berriman, LIGO LSC Meeting, Pasadena, California, March, 2015.
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SSI: Distributed Workfow Management Research and Software in Support of Science
E. Deelman, M. Livny, Washington DC., , February, 2015.
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PANORAMA: Modeling the Performance of Scientific Workflows
E. Deelman, C. Carothers, A. Mandal, B. Tierney, J. Vetter, I. Baldin, C. Castillo, G. Juve, D. Król, V. Lynch, B. Mayer, J. Meredith, T. Proffen, P. Ruth, R. Ferreira da Silva, Workshop on Modeling and Simulation (Modsim), August, 2015.
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2014

Genome and Transcriptome Free Analysis of RNA-Seq Data using Cloud Computing
T. Souaiaia, R. Mayani, K. Vahi, J. Herstein, O. Evagrafov, T. Chen, E. Deelman, D. Briggs, J. Knowles, ASHG 2014, San Diego, October, 2014.
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Compute Pipelines with Advanced Data Management using Pegasus WMS
K. Vahi, M. Rynge, E. Deelman, G. Juve, R. Mayani, R. Ferreira da Silva, ADASS 2014, Calgary, Canada, October, 2014.
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Pegasus WMS: Enabling Large Scale Workflows on National Cyberinfrastructure
K. Vahi, E. Deelman, G. Juve, M. Rynge, R. Mayani, R. Ferreira da Silva, XSEDE 2014, Atlanta, July, 2014.
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Next Generation Resequencing of Soybean Germplasm for Trait Discovery on XSEDE using Pegasus Workflows and iPlant Infrastructure
T. Joshi, B. Valliyodan, S. M. Khan, Y. Liu, J. V. M. dos Santos, Y. Jiao, D. Xu, H. T. Nguyen, N. Hopkins, M. Rynge, N. Merchant, XSEDE 2014, Atlanta, July, 2014.
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ECSS Workflows – An Overview and Update
M. Rynge, M. Pierce, S. Marru, XSEDE 2014, Atlanta, July, 2014.
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SSI: Distributed Workflow Management Research and Software in Support of Science
E. Deelman, M. Livny, SI2 PI Meeting, February, 2014.
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Conducting Large-Scale Imputation Studies on the Cloud
S. Buyske, K. Vahi, E. Deelman, U. Peters, T. Matise, ASHG’13, Boston, October, .
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2013

Pegasus WMS: Enabling Large Scale Workflows on National Cyberinfrastructure
K. Vahi, E. Deelman, G. Juve, M. Rynge, R. Mayani, S. Callaghan, P. Maechling, XSEDE’13, San Diego, July, 2013.
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Introducing PRECIP – Pegasus Repeatable Experiments for the Cloud in Python
S. Azaroosh, M. Rynge, G. Juve, E. Deelman, XSEDE’13, San Diego, July, 2013.
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Bosco – A simple interface for managing jobs on both XSEDE and campus computing resources
D. Weitzel, D. Fraser, M. Ahronovitz, M. Rynge, XSEDE’13, San Diego, July, 2013.
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SSI: Distributed Workflow Management Research and Software in Support of Science
E. Deelman, M. Livny, SI2 PI Meeting, February, 2013.
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2012

Curating genomic epidemiology data in The PAGE Study
G. Kumaraguruparan, G. Mehta, A. Nato, J. L. Ambite, S. Buyske, R. Mayani, C. Cai, J. Vockler, E. Deelman, T. Matise, ASHG’12, San Francisco, November, 2012.
RseqFlow: Workflows for RNA-Seq data analysis
Y. Wang, G. Mehta , R. Mayani ,T. Souaiaia , Y. Chen, A. Clark , L. Wan, O. V. Evgrafov, J. A. Knowles , E. Deelman, T. Chen, ISMB’12, Long Beach, July, 2012.
Enabling Bioinformatics Workflows on Leadership Class Systems with Virtual Machines
G. Mehta, T. Souaiaia, R. Mayani, Y. Wang, E. Deelman, T. Chen, J. Knowles, XSEDE’12, Chicago, July, 2012.
Pegasus WMS: Enabling Large Scale Workflows on National Cyberinfrastructure
K. Vahi, E. Deelman, G. Juve, G. Mehta, M. Rynge, R. Mayani, S. Callaghan, P. Maechling, XSEDE’12, Chicago, July, 2012.
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Leveraging Pegasus 4.0 and GlideinWMS for Data Intensive Workflows on OSG
K. Vahi, E. Deelman, G. Juve, G. Mehta, M. Rynge, R. Mayani, S. Callaghan, P. Maechling, OSG All Hands Meeting’12, Lincoln, March, 2012.
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2011

Pegasus WMS: Enabling Bioinformatics using Workflow Technologies
G. Mehta, E. Deelman, K. Vahi, Y. Wang, A. Clark, R. Mayani, T. Chen, J. Knowles, 12th International Congress of Human Genetics/61st Annual Meeting of The American Society of Human Genetics, Montreal, Canada, October, 2011.
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Generating Large Scale pedigree drawings for Genetic Studies
R. Mayani, G. Mehta, E. Deelman, K. Seth, J. Vöckler, F. Wang, 12th International Congress of Human Genetics/61st Annual Meeting of The American Society of Human Genetics, Montreal, Canada, October, 2011.
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Stampede: A Framework for Monitoring and Troubleshooting of Large-Scale Applications on National Cyberinfrastructure
F. Silva, C. Brooks, E. Deelman, M. Goode, D. Gunter, G. Juve, G. Mehta, P. Moraes, T. Samak, M. Swany, P. Thomas, K. Vahi, Teragrid 2011, Salt Lake City, June, 2011.
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Pegasus WMS: Enabling Large Science on National CyberInfrastructure
K. Vahi, E. Deelman, G. Mehta, M. Rynge, F. Silva, P. Thomas, J. Vockler, B. Berriman, Teragrid 2011, Salt Lake City, June, 2011.
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Wrangler: Virtual Cluster Provisioning for the Cloud
G. Juve, E. Deelman, HPDC’11, Best Poster, June, 2011.
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2007

Workflow Task Clustering for Best Effort Systems with Pegasus
G. Singh, M.H. Su, K. Vahi, E. Deelman, G. Mehta, B. Berriman, J. Good, D. S. Katz, Teragrid, , 2007.
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